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authorYour Name <you@example.com>2024-05-13 09:39:53 -0400
committerYour Name <you@example.com>2024-05-13 09:39:53 -0400
commit37ffc69090453baca62c93a4f746996df417dfa8 (patch)
tree01186e02e936538e1fc82a6fac6a5413d59f4907
parent5facdb9ada7bb44a0beeed734bc81c48013a2a1e (diff)
downloadannotator-master.tar.gz
annotator-master.tar.bz2
annotator-master.zip
Switched crop target from npz to hdf5HEADmaster
-rwxr-xr-xmakeCrop.py19
1 files changed, 17 insertions, 2 deletions
diff --git a/makeCrop.py b/makeCrop.py
index 19ce369..70b2fc2 100755
--- a/makeCrop.py
+++ b/makeCrop.py
@@ -8,22 +8,27 @@ parser.add_argument('video', help='Path to video to crop')
parser.add_argument('--intermediary', help='Path to intermediary video if size differs')
parser.add_argument('--no-interpolate', help='Do not interpolate over gaps between box updates', action='store_true')
parser.add_argument('--label', help='Boxes label (uses all if not provided)')
-parser.add_argument('--save-stem', help='Location to save stem.npz and stem.avi', default='out')
+parser.add_argument('--save-stem', help='Location to save stem.hdf5 and stem.avi', default='out')
parser.add_argument('--skip-zero-boxes', help='Skip boxes with zero size', action='store_true')
parser.add_argument('--outputWH', help='Output width and height', nargs=2, default=[64,64], type=int)
parser.add_argument('--debug', help='Save a debugging video as well', action='store_true')
+parser.add_argument('--extraMetadata', help='Path to json-formatted extra metadata (in addition to embedded in video file)')
args = parser.parse_args()
OUTW, OUTH = args.outputWH
import csv
+import json
+import subprocess
with open(args.boxes) as f:
boxes = list(csv.reader(f))
if args.label:
boxes = [b for b in boxes if b[0] == args.label]
+metadata=json.loads(subprocess.check_output(['ffprobe', '-v', 'quiet', '-print_format', 'json', '-show_format', '-show_streams', args.video]))
+
import cv2
cap = cv2.VideoCapture(args.video)
width = cap.get(cv2.CAP_PROP_FRAME_WIDTH)
@@ -32,7 +37,9 @@ fps = cap.get(cv2.CAP_PROP_FPS)
zoomX = 1.0
zoomY = 1.0
+
if args.intermediary:
+ metadata=json.loads(subprocess.check_output(['ffprobe', '-v', 'quiet', '-print_format', 'json', '-show_format', '-show_streams', args.intermediary]))
inter = cv2.VideoCapture(args.intermediary)
interWidth = inter.get(cv2.CAP_PROP_FRAME_WIDTH)
interHeight = inter.get(cv2.CAP_PROP_FRAME_HEIGHT)
@@ -40,6 +47,10 @@ if args.intermediary:
zoomY = height / interHeight
inter.release()
+if args.extraMetadata:
+ with open(args.extraMetadata) as f:
+ metadata['extra'] = json.load(f)
+
# Each box is [str(label), float(time), int(x1), int(y1), int(x2), int(y2)]
boxes = [[b[0], float(b[1]), int(int(b[2]) * zoomX), int(int(b[3]) * zoomY), int(int(b[4]) * zoomX), int(int(b[5]) * zoomY)] for b in boxes]
@@ -92,6 +103,7 @@ def shift(box: list, w: int, h: int) -> list:
boxes = [box[0:2] + shift(alignDims(box[2:], OUTW/OUTH), width, height) for box in boxes]
import numpy as np
+import h5py
outArry = []
outVid = cv2.VideoWriter(args.save_stem + '.avi', cv2.VideoWriter_fourcc('M','J','P','G'), fps, (OUTW, OUTH))
@@ -141,4 +153,7 @@ bar.finish()
print(f'Ending at time = {time}')
# Save out array
-np.savez_compressed(args.save_stem + '.npz', np.array(outArry))
+#np.savez_compressed(args.save_stem + '.npz', np.array(outArry))
+with h5py.File(args.save_stem + '.hdf5', 'w') as f:
+ f.create_dataset('data', data=np.array(outArry))
+ f.attrs['metadata'] = json.dumps(metadata)